Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Lnp1A0A1B0GSK3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Lnp1A0A1B0GSK3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lnp1A0A1B0GSK3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lnp1A0A1B0GSK3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lnp1A0A1B0GSK3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lnp1A0A1B0GSK3 Gm27502-201ENSMUST00000183495 199 ntBASIC18.19■□□□□ 0.5
Lnp1A0A1B0GSK3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lnp1A0A1B0GSK3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Lnp1A0A1B0GSK3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lnp1A0A1B0GSK3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Lnp1A0A1B0GSK3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lnp1A0A1B0GSK3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lnp1A0A1B0GSK3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lnp1A0A1B0GSK3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lnp1A0A1B0GSK3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lnp1A0A1B0GSK3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lnp1A0A1B0GSK3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lnp1A0A1B0GSK3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Lnp1A0A1B0GSK3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lnp1A0A1B0GSK3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.17■□□□□ 0.5
Lnp1A0A1B0GSK3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lnp1A0A1B0GSK3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lnp1A0A1B0GSK3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lnp1A0A1B0GSK3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.17■□□□□ 0.5
Lnp1A0A1B0GSK3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lnp1A0A1B0GSK3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.17■□□□□ 0.5
Lnp1A0A1B0GSK3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lnp1A0A1B0GSK3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lnp1A0A1B0GSK3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lnp1A0A1B0GSK3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Lnp1A0A1B0GSK3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lnp1A0A1B0GSK3 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.16■□□□□ 0.5
Lnp1A0A1B0GSK3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lnp1A0A1B0GSK3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lnp1A0A1B0GSK3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lnp1A0A1B0GSK3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lnp1A0A1B0GSK3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lnp1A0A1B0GSK3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lnp1A0A1B0GSK3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lnp1A0A1B0GSK3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lnp1A0A1B0GSK3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.14■□□□□ 0.49
Lnp1A0A1B0GSK3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lnp1A0A1B0GSK3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lnp1A0A1B0GSK3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Lnp1A0A1B0GSK3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lnp1A0A1B0GSK3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lnp1A0A1B0GSK3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lnp1A0A1B0GSK3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lnp1A0A1B0GSK3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lnp1A0A1B0GSK3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lnp1A0A1B0GSK3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.13■□□□□ 0.49
Lnp1A0A1B0GSK3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lnp1A0A1B0GSK3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lnp1A0A1B0GSK3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lnp1A0A1B0GSK3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lnp1A0A1B0GSK3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 166.6 ms