Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm3880A0A1B0GSB3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm3880A0A1B0GSB3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Gm26766-202ENSMUST00000227544 2347 ntBASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm3880A0A1B0GSB3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Gm3880A0A1B0GSB3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Gm3880A0A1B0GSB3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Gm3880A0A1B0GSB3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gm3880A0A1B0GSB3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm3880A0A1B0GSB3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Gm3880A0A1B0GSB3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm3880A0A1B0GSB3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Gm3880A0A1B0GSB3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm3880A0A1B0GSB3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm3880A0A1B0GSB3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm3880A0A1B0GSB3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gm3880A0A1B0GSB3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gm3880A0A1B0GSB3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Gm3880A0A1B0GSB3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gm3880A0A1B0GSB3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Gm3880A0A1B0GSB3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Gm3880A0A1B0GSB3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gm3880A0A1B0GSB3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm3880A0A1B0GSB3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms