Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Particl-201ENSMUST00000205370 1560 ntBASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.05■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.02■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.01■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.99■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.99■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trdv2-1A0A0G2JGB9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.98■□□□□ 0.15
Trdv2-1A0A0G2JGB9 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.98■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trdv2-1A0A0G2JGB9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trdv2-1A0A0G2JGB9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.97■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.97■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trdv2-1A0A0G2JGB9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trdv2-1A0A0G2JGB9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trdv2-1A0A0G2JGB9 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms