Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav4-3A0A0B4J1K1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15□□□□□ -0.01
Trav4-3A0A0B4J1K1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-3A0A0B4J1K1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-3A0A0B4J1K1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav4-3A0A0B4J1K1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav4-3A0A0B4J1K1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-3A0A0B4J1K1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-3A0A0B4J1K1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.99□□□□□ -0.01
Trav4-3A0A0B4J1K1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav4-3A0A0B4J1K1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-3A0A0B4J1K1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Trav4-3A0A0B4J1K1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-3A0A0B4J1K1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-3A0A0B4J1K1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-3A0A0B4J1K1 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.97□□□□□ -0.01
Trav4-3A0A0B4J1K1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav4-3A0A0B4J1K1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-3A0A0B4J1K1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-3A0A0B4J1K1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-3A0A0B4J1K1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-3A0A0B4J1K1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-3A0A0B4J1K1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-3A0A0B4J1K1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-3A0A0B4J1K1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-3A0A0B4J1K1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-3A0A0B4J1K1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-3A0A0B4J1K1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-3A0A0B4J1K1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-3A0A0B4J1K1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-3A0A0B4J1K1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4-3A0A0B4J1K1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4-3A0A0B4J1K1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav4-3A0A0B4J1K1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4-3A0A0B4J1K1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav4-3A0A0B4J1K1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4-3A0A0B4J1K1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav4-3A0A0B4J1K1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav4-3A0A0B4J1K1 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4-3A0A0B4J1K1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav4-3A0A0B4J1K1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4-3A0A0B4J1K1 Gm22567-201ENSMUST00000175542 342 ntBASIC14.88□□□□□ -0.03
Trav4-3A0A0B4J1K1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4-3A0A0B4J1K1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4-3A0A0B4J1K1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4-3A0A0B4J1K1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms