Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav18A0A075B656 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav18A0A075B656 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav18A0A075B656 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav18A0A075B656 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav18A0A075B656 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav18A0A075B656 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav18A0A075B656 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.91■□□□□ 0.46
Trav18A0A075B656 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav18A0A075B656 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav18A0A075B656 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav18A0A075B656 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.9■□□□□ 0.46
Trav18A0A075B656 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav18A0A075B656 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav18A0A075B656 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav18A0A075B656 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav18A0A075B656 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.89■□□□□ 0.45
Trav18A0A075B656 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav18A0A075B656 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav18A0A075B656 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.89■□□□□ 0.45
Trav18A0A075B656 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav18A0A075B656 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav18A0A075B656 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.88■□□□□ 0.45
Trav18A0A075B656 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.88■□□□□ 0.45
Trav18A0A075B656 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.86■□□□□ 0.45
Trav18A0A075B656 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.86■□□□□ 0.45
Trav18A0A075B656 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav18A0A075B656 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav18A0A075B656 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav18A0A075B656 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav18A0A075B656 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav18A0A075B656 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav18A0A075B656 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav18A0A075B656 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav18A0A075B656 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav18A0A075B656 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav18A0A075B656 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav18A0A075B656 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.82■□□□□ 0.44
Trav18A0A075B656 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav18A0A075B656 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav18A0A075B656 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav18A0A075B656 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav18A0A075B656 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav18A0A075B656 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.8■□□□□ 0.44
Trav18A0A075B656 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav18A0A075B656 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 168.6 ms