Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.94■□□□□ 0.46
Trav18A0A075B656 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav18A0A075B656 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav18A0A075B656 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav18A0A075B656 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav18A0A075B656 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav18A0A075B656 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav18A0A075B656 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav18A0A075B656 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav18A0A075B656 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.91■□□□□ 0.46
Trav18A0A075B656 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav18A0A075B656 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav18A0A075B656 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav18A0A075B656 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.9■□□□□ 0.46
Trav18A0A075B656 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav18A0A075B656 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav18A0A075B656 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav18A0A075B656 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav18A0A075B656 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.89■□□□□ 0.45
Trav18A0A075B656 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav18A0A075B656 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav18A0A075B656 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.89■□□□□ 0.45
Trav18A0A075B656 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav18A0A075B656 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav18A0A075B656 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.88■□□□□ 0.45
Trav18A0A075B656 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.88■□□□□ 0.45
Trav18A0A075B656 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav18A0A075B656 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav18A0A075B656 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.86■□□□□ 0.45
Trav18A0A075B656 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.86■□□□□ 0.45
Trav18A0A075B656 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav18A0A075B656 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav18A0A075B656 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav18A0A075B656 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav18A0A075B656 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav18A0A075B656 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav18A0A075B656 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav18A0A075B656 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav18A0A075B656 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav18A0A075B656 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav18A0A075B656 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav18A0A075B656 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav18A0A075B656 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav18A0A075B656 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.82■□□□□ 0.44
Trav18A0A075B656 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav18A0A075B656 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav18A0A075B656 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav18A0A075B656 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav18A0A075B656 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav18A0A075B656 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav18A0A075B656 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.8■□□□□ 0.44
Trav18A0A075B656 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav18A0A075B656 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.8■□□□□ 0.44
Trav18A0A075B656 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms