Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav4-2A0A075B638 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav4-2A0A075B638 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav4-2A0A075B638 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-2A0A075B638 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.38■□□□□ 0.37
Trav4-2A0A075B638 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-2A0A075B638 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-2A0A075B638 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-2A0A075B638 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.37■□□□□ 0.37
Trav4-2A0A075B638 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4-2A0A075B638 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4-2A0A075B638 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4-2A0A075B638 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4-2A0A075B638 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4-2A0A075B638 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4-2A0A075B638 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav4-2A0A075B638 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav4-2A0A075B638 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trav4-2A0A075B638 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav4-2A0A075B638 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trav4-2A0A075B638 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-2A0A075B638 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-2A0A075B638 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.34■□□□□ 0.37
Trav4-2A0A075B638 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-2A0A075B638 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4-2A0A075B638 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4-2A0A075B638 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4-2A0A075B638 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.33■□□□□ 0.37
Trav4-2A0A075B638 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4-2A0A075B638 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav4-2A0A075B638 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4-2A0A075B638 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4-2A0A075B638 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4-2A0A075B638 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Notumos-201ENSMUST00000151998 2659 ntBASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4-2A0A075B638 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav4-2A0A075B638 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav4-2A0A075B638 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav4-2A0A075B638 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav4-2A0A075B638 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav4-2A0A075B638 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav4-2A0A075B638 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav4-2A0A075B638 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.3■□□□□ 0.36
Trav4-2A0A075B638 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Trav4-2A0A075B638 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.3■□□□□ 0.36
Trav4-2A0A075B638 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav4-2A0A075B638 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav4-2A0A075B638 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4-2A0A075B638 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4-2A0A075B638 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4-2A0A075B638 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav4-2A0A075B638 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-2A0A075B638 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-2A0A075B638 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-2A0A075B638 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-2A0A075B638 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-2A0A075B638 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4-2A0A075B638 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav4-2A0A075B638 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav4-2A0A075B638 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav4-2A0A075B638 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav4-2A0A075B638 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Trav4-2A0A075B638 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trav4-2A0A075B638 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trav4-2A0A075B638 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.26■□□□□ 0.35
Trav4-2A0A075B638 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms