Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-6A0A075B603 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav6-6A0A075B603 Gm37136-201ENSMUST00000194368 194 ntBASIC16.27■□□□□ 0.2
Trav6-6A0A075B603 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-6A0A075B603 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-6A0A075B603 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-6A0A075B603 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-6A0A075B603 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav6-6A0A075B603 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-6A0A075B603 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-6A0A075B603 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-6A0A075B603 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.25■□□□□ 0.19
Trav6-6A0A075B603 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav6-6A0A075B603 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-6A0A075B603 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav6-6A0A075B603 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-6A0A075B603 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav6-6A0A075B603 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Gm6821-201ENSMUST00000107540 542 ntBASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-6A0A075B603 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6-6A0A075B603 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-6A0A075B603 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav6-6A0A075B603 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-6A0A075B603 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6-6A0A075B603 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trav6-6A0A075B603 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-6A0A075B603 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-6A0A075B603 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-6A0A075B603 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-6A0A075B603 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trav6-6A0A075B603 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-6A0A075B603 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-6A0A075B603 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-6A0A075B603 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-6A0A075B603 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6-6A0A075B603 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.2■□□□□ 0.18
Trav6-6A0A075B603 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav6-6A0A075B603 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-6A0A075B603 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-6A0A075B603 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-6A0A075B603 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-6A0A075B603 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav6-6A0A075B603 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav6-6A0A075B603 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-6A0A075B603 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-6A0A075B603 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav6-6A0A075B603 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-6A0A075B603 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-6A0A075B603 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-6A0A075B603 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-6A0A075B603 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav6-6A0A075B603 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-6A0A075B603 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-6A0A075B603 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-6A0A075B603 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-6A0A075B603 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-6A0A075B603 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 125.3 ms