Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Gm15823-201ENSMUST00000064305 670 ntBASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Gm5745-201ENSMUST00000183748 313 ntBASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Gm18027-201ENSMUST00000218947 619 ntBASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcb1Q9Z0H3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcb1Q9Z0H3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Gm8515-201ENSMUST00000194852 576 ntBASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Gm18018-201ENSMUST00000198273 408 ntBASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms