Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn3Q9ES97 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Gm13616-201ENSMUST00000120600 222 ntBASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.21■□□□□ 0.03
Rtn3Q9ES97 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.21■□□□□ 0.03
Rtn3Q9ES97 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Rtn3Q9ES97 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn3Q9ES97 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn3Q9ES97 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn3Q9ES97 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn3Q9ES97 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn3Q9ES97 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn3Q9ES97 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Gm25287-201ENSMUST00000103846 110 ntBASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Gm22918-201ENSMUST00000103855 110 ntBASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Mir6956-201ENSMUST00000183598 62 ntBASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn3Q9ES97 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.19■□□□□ 0.02
Rtn3Q9ES97 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Gm6973-201ENSMUST00000117080 721 ntBASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Gm24158-201ENSMUST00000175263 71 ntBASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Olfr286-202ENSMUST00000205305 969 ntBASIC15.19■□□□□ 0.02
Rtn3Q9ES97 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms