Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Raet1eQ9CZQ6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Raet1eQ9CZQ6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Raet1eQ9CZQ6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Raet1eQ9CZQ6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Raet1eQ9CZQ6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Raet1eQ9CZQ6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Gm7787-201ENSMUST00000216858 688 ntBASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Raet1eQ9CZQ6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Raet1eQ9CZQ6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Raet1eQ9CZQ6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms