Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.47■□□□□ 0.23
Smc1bQ920F6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gm5566-201ENSMUST00000116118 459 ntBASIC16.47■□□□□ 0.23
Smc1bQ920F6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.47■□□□□ 0.23
Smc1bQ920F6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gm9908-201ENSMUST00000211534 448 ntBASIC16.47■□□□□ 0.23
Smc1bQ920F6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Shd-206ENSMUST00000225145 998 ntBASIC16.47■□□□□ 0.23
Smc1bQ920F6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.47■□□□□ 0.23
Smc1bQ920F6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.47■□□□□ 0.23
Smc1bQ920F6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc1bQ920F6 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.46■□□□□ 0.23
Smc1bQ920F6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Gm13829-201ENSMUST00000119600 138 ntBASIC16.46■□□□□ 0.23
Smc1bQ920F6 Mir1938-201ENSMUST00000158746 100 ntBASIC16.46■□□□□ 0.23
Smc1bQ920F6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smc1bQ920F6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.46■□□□□ 0.23
Smc1bQ920F6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Smc1bQ920F6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smc1bQ920F6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smc1bQ920F6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smc1bQ920F6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Gm20445-201ENSMUST00000061905 565 ntBASIC16.45■□□□□ 0.22
Smc1bQ920F6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smc1bQ920F6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms