Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SAPCD2P3-201ENST00000455031 850 ntBASIC17.72■□□□□ 0.43
SCG3Q8WXD2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 AP005901.3-202ENST00000581653 237 ntBASIC17.72■□□□□ 0.43
SCG3Q8WXD2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 AL591684.3-201ENST00000605187 298 ntBASIC17.72■□□□□ 0.43
SCG3Q8WXD2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 AL023806.1-201ENST00000603994 1649 ntBASIC17.72■□□□□ 0.43
SCG3Q8WXD2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.72■□□□□ 0.43
SCG3Q8WXD2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 AC009949.1-201ENST00000623048 1830 ntBASIC17.71■□□□□ 0.43
SCG3Q8WXD2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 AC104692.2-201ENST00000603054 253 ntBASIC17.71■□□□□ 0.43
SCG3Q8WXD2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG3Q8WXD2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.71■□□□□ 0.42
SCG3Q8WXD2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SCG3Q8WXD2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SCG3Q8WXD2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SCG3Q8WXD2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 AC079781.3-201ENST00000449110 356 ntBASIC17.7■□□□□ 0.42
SCG3Q8WXD2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 AC096582.2-201ENST00000510860 516 ntBASIC17.7■□□□□ 0.42
SCG3Q8WXD2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 REXO1L6P-202ENST00000619970 1078 ntBASIC17.7■□□□□ 0.42
SCG3Q8WXD2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG3Q8WXD2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCG3Q8WXD2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms