Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CroccQ8CJ40 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.67□□□□□ -0.22
CroccQ8CJ40 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CroccQ8CJ40 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CroccQ8CJ40 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Gm24543-201ENSMUST00000103867 82 ntBASIC13.66□□□□□ -0.22
CroccQ8CJ40 Gm5566-201ENSMUST00000116118 459 ntBASIC13.66□□□□□ -0.22
CroccQ8CJ40 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.66□□□□□ -0.22
CroccQ8CJ40 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.66□□□□□ -0.22
CroccQ8CJ40 Gm18027-201ENSMUST00000218947 619 ntBASIC13.66□□□□□ -0.22
CroccQ8CJ40 Mir125a-201ENSMUST00000083545 68 ntBASIC13.66□□□□□ -0.22
CroccQ8CJ40 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Gm28630-201ENSMUST00000187806 498 ntBASIC13.65□□□□□ -0.22
CroccQ8CJ40 Gm2213-201ENSMUST00000197485 688 ntBASIC13.65□□□□□ -0.22
CroccQ8CJ40 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.65□□□□□ -0.22
CroccQ8CJ40 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CroccQ8CJ40 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CroccQ8CJ40 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
CroccQ8CJ40 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.65□□□□□ -0.23
CroccQ8CJ40 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Gm33320-201ENSMUST00000192232 530 ntBASIC13.64□□□□□ -0.23
CroccQ8CJ40 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
CroccQ8CJ40 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CroccQ8CJ40 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms