Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Gm14928-201ENSMUST00000120198 477 ntBASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip3Q8CHD8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Gm6912-201ENSMUST00000117218 544 ntBASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Gm12490-201ENSMUST00000120255 560 ntBASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip3Q8CHD8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Gm18624-201ENSMUST00000220966 658 ntBASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip3Q8CHD8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rab11fip3Q8CHD8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rab11fip3Q8CHD8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Rab11fip3Q8CHD8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms