Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Rpph1-201ENSMUST00000175096 319 ntBASIC12.73□□□□□ -0.37
ShfQ8CG80 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.73□□□□□ -0.37
ShfQ8CG80 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.73□□□□□ -0.37
ShfQ8CG80 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ShfQ8CG80 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ShfQ8CG80 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.73□□□□□ -0.37
ShfQ8CG80 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShfQ8CG80 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
ShfQ8CG80 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ShfQ8CG80 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.72□□□□□ -0.37
ShfQ8CG80 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
ShfQ8CG80 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.72□□□□□ -0.37
ShfQ8CG80 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ShfQ8CG80 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
ShfQ8CG80 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ShfQ8CG80 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.71□□□□□ -0.37
ShfQ8CG80 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.71□□□□□ -0.37
ShfQ8CG80 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.71□□□□□ -0.37
ShfQ8CG80 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ShfQ8CG80 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
ShfQ8CG80 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ShfQ8CG80 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ShfQ8CG80 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ShfQ8CG80 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ShfQ8CG80 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ShfQ8CG80 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ShfQ8CG80 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ShfQ8CG80 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.71□□□□□ -0.38
ShfQ8CG80 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ShfQ8CG80 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.38
ShfQ8CG80 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
ShfQ8CG80 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.7□□□□□ -0.38
ShfQ8CG80 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.7□□□□□ -0.38
ShfQ8CG80 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.7□□□□□ -0.38
ShfQ8CG80 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm6973-201ENSMUST00000117080 721 ntBASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm11543-201ENSMUST00000120758 370 ntBASIC12.7□□□□□ -0.38
ShfQ8CG80 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms