Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco3Q8BQM7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 AA414768-201ENSMUST00000121924 1257 ntBASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Gm23634-201ENSMUST00000175071 91 ntBASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.74□□□□□ -0.53
Smco3Q8BQM7 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms