Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Gm7862-201ENSMUST00000121461 292 ntBASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scaf4Q6PFF0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Scaf4Q6PFF0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Gm13597-201ENSMUST00000121239 375 ntBASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Gm10154-201ENSMUST00000084445 354 ntBASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scaf4Q6PFF0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm13036-201ENSMUST00000117799 748 ntBASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm16198-201ENSMUST00000118766 670 ntBASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scaf4Q6PFF0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms