Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Gm17794-201ENSMUST00000220252 955 ntBASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nup98Q6PFD9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Gm38223-201ENSMUST00000194484 695 ntBASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup98Q6PFD9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup98Q6PFD9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Proscos-202ENSMUST00000178990 666 ntBASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nup98Q6PFD9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nup98Q6PFD9 Gm11814-201ENSMUST00000119515 929 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms