Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sema3bQ62177 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sema3bQ62177 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sema3bQ62177 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sema3bQ62177 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sema3bQ62177 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sema3bQ62177 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Sema3bQ62177 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Sema3bQ62177 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Sema3bQ62177 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.61□□□□□ -0.23
Sema3bQ62177 Mir1938-201ENSMUST00000158746 100 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Gm3436-201ENSMUST00000179930 840 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Gm43703-201ENSMUST00000200523 763 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Gm46209-201ENSMUST00000217912 553 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sema3bQ62177 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Sema3bQ62177 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sema3bQ62177 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.61□□□□□ -0.23
Sema3bQ62177 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Gm15824-201ENSMUST00000119516 955 ntBASIC13.6□□□□□ -0.23
Sema3bQ62177 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.6□□□□□ -0.23
Sema3bQ62177 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.6□□□□□ -0.23
Sema3bQ62177 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sema3bQ62177 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.6□□□□□ -0.23
Sema3bQ62177 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sema3bQ62177 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sema3bQ62177 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sema3bQ62177 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sema3bQ62177 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.59□□□□□ -0.23
Sema3bQ62177 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.59□□□□□ -0.23
Sema3bQ62177 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
Sema3bQ62177 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sema3bQ62177 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sema3bQ62177 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms