Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ecm1Q61508 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.7■□□□□ 0.1
Ecm1Q61508 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.7■□□□□ 0.1
Ecm1Q61508 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.7■□□□□ 0.1
Ecm1Q61508 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.7■□□□□ 0.1
Ecm1Q61508 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ecm1Q61508 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.7■□□□□ 0.1
Ecm1Q61508 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ecm1Q61508 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ecm1Q61508 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.69■□□□□ 0.1
Ecm1Q61508 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.69■□□□□ 0.1
Ecm1Q61508 Sybu-209ENSMUST00000228639 4113 ntBASIC15.69■□□□□ 0.1
Ecm1Q61508 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.69■□□□□ 0.1
Ecm1Q61508 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.69■□□□□ 0.1
Ecm1Q61508 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.69■□□□□ 0.1
Ecm1Q61508 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.69■□□□□ 0.1
Ecm1Q61508 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.69■□□□□ 0.1
Ecm1Q61508 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.69■□□□□ 0.1
Ecm1Q61508 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Mir497b-201ENSMUST00000093601 125 ntBASIC15.69■□□□□ 0.1
Ecm1Q61508 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ecm1Q61508 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.69■□□□□ 0.1
Ecm1Q61508 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ecm1Q61508 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ecm1Q61508 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Gm12485-201ENSMUST00000119641 291 ntBASIC15.68■□□□□ 0.1
Ecm1Q61508 Gm14660-201ENSMUST00000119809 575 ntBASIC15.68■□□□□ 0.1
Ecm1Q61508 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Snora78-201ENSMUST00000158630 128 ntBASIC15.68■□□□□ 0.1
Ecm1Q61508 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ecm1Q61508 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Gm27847-201ENSMUST00000183711 107 ntBASIC15.68■□□□□ 0.1
Ecm1Q61508 Gm27375-201ENSMUST00000183799 107 ntBASIC15.68■□□□□ 0.1
Ecm1Q61508 Gm6091-201ENSMUST00000098307 165 ntBASIC15.68■□□□□ 0.1
Ecm1Q61508 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ecm1Q61508 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ecm1Q61508 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms