Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.94□□□□□ -0.18
Vsx2Q61412 Gm2810-201ENSMUST00000118681 990 ntBASIC13.94□□□□□ -0.18
Vsx2Q61412 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Vsx2Q61412 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Vsx2Q61412 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Gm38225-201ENSMUST00000194001 393 ntBASIC13.94□□□□□ -0.18
Vsx2Q61412 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.94□□□□□ -0.18
Vsx2Q61412 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.94□□□□□ -0.18
Vsx2Q61412 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.94□□□□□ -0.18
Vsx2Q61412 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx2Q61412 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vsx2Q61412 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vsx2Q61412 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vsx2Q61412 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Vsx2Q61412 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Vsx2Q61412 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.93□□□□□ -0.18
Vsx2Q61412 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vsx2Q61412 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.93□□□□□ -0.18
Vsx2Q61412 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.93□□□□□ -0.18
Vsx2Q61412 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vsx2Q61412 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.93□□□□□ -0.18
Vsx2Q61412 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx2Q61412 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Vsx2Q61412 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vsx2Q61412 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vsx2Q61412 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Vsx2Q61412 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.92□□□□□ -0.18
Vsx2Q61412 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
Vsx2Q61412 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Gm24158-201ENSMUST00000175263 71 ntBASIC13.92□□□□□ -0.18
Vsx2Q61412 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.92□□□□□ -0.18
Vsx2Q61412 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx2Q61412 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.92□□□□□ -0.18
Vsx2Q61412 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.92□□□□□ -0.18
Vsx2Q61412 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms