Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Six4Q61321 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Six4Q61321 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.39□□□□□ -0.11
Six4Q61321 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Six4Q61321 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Six4Q61321 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Six4Q61321 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.39□□□□□ -0.11
Six4Q61321 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.39□□□□□ -0.11
Six4Q61321 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Six4Q61321 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.39□□□□□ -0.11
Six4Q61321 Gm17837-201ENSMUST00000186435 985 ntBASIC14.39□□□□□ -0.11
Six4Q61321 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.39□□□□□ -0.11
Six4Q61321 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.39□□□□□ -0.11
Six4Q61321 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.39□□□□□ -0.11
Six4Q61321 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Six4Q61321 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six4Q61321 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.38□□□□□ -0.11
Six4Q61321 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.38□□□□□ -0.11
Six4Q61321 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.38□□□□□ -0.11
Six4Q61321 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Six4Q61321 AA543401-201ENSMUST00000164248 1269 ntBASIC14.38□□□□□ -0.11
Six4Q61321 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Six4Q61321 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.38□□□□□ -0.11
Six4Q61321 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Six4Q61321 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Six4Q61321 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six4Q61321 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.37□□□□□ -0.11
Six4Q61321 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Six4Q61321 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.37□□□□□ -0.11
Six4Q61321 Gm6916-202ENSMUST00000205523 195 ntBASIC14.37□□□□□ -0.11
Six4Q61321 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms