Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox9Q04887 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sox9Q04887 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.67□□□□□ -0.06
Sox9Q04887 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox9Q04887 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox9Q04887 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox9Q04887 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox9Q04887 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.66□□□□□ -0.06
Sox9Q04887 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox9Q04887 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.66□□□□□ -0.06
Sox9Q04887 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Gm11524-201ENSMUST00000119349 807 ntBASIC14.66□□□□□ -0.06
Sox9Q04887 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.66□□□□□ -0.06
Sox9Q04887 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.66□□□□□ -0.06
Sox9Q04887 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox9Q04887 Gm44364-201ENSMUST00000198368 141 ntBASIC14.66□□□□□ -0.06
Sox9Q04887 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.66□□□□□ -0.06
Sox9Q04887 Gm18905-201ENSMUST00000205454 928 ntBASIC14.66□□□□□ -0.06
Sox9Q04887 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox9Q04887 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox9Q04887 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox9Q04887 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.65□□□□□ -0.06
Sox9Q04887 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.65□□□□□ -0.06
Sox9Q04887 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.65□□□□□ -0.06
Sox9Q04887 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Gm43094-201ENSMUST00000196549 921 ntBASIC14.65□□□□□ -0.06
Sox9Q04887 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Gm19309-201ENSMUST00000218295 205 ntBASIC14.65□□□□□ -0.06
Sox9Q04887 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.65□□□□□ -0.06
Sox9Q04887 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sox9Q04887 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox9Q04887 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox9Q04887 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms