Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Xcl1P47993 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Xcl1P47993 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Xcl1P47993 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Xcl1P47993 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Xcl1P47993 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Xcl1P47993 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Xcl1P47993 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Xcl1P47993 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC9.25□□□□□ -0.93
Xcl1P47993 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC9.25□□□□□ -0.93
Xcl1P47993 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Gm4081-201ENSMUST00000195287 1838 ntBASIC9.25□□□□□ -0.93
Xcl1P47993 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.25□□□□□ -0.93
Xcl1P47993 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.25□□□□□ -0.93
Xcl1P47993 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Xcl1P47993 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Xcl1P47993 Gm37795-201ENSMUST00000194216 2459 ntBASIC9.25□□□□□ -0.93
Xcl1P47993 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC9.25□□□□□ -0.93
Xcl1P47993 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Gm9889-202ENSMUST00000206983 1577 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Xcl1P47993 Gm11336-201ENSMUST00000118168 334 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Gm12085-201ENSMUST00000119263 940 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Gm38027-201ENSMUST00000192315 235 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC9.24□□□□□ -0.93
Xcl1P47993 Gm7791-201ENSMUST00000219066 539 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Gm13241-201ENSMUST00000094493 780 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Xcl1P47993 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.24□□□□□ -0.93
Xcl1P47993 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 AC124581.1-201ENSMUST00000225416 1399 ntBASIC9.24□□□□□ -0.93
Xcl1P47993 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Xcl1P47993 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms