Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa3P35584 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa3P35584 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa3P35584 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa3P35584 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa3P35584 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Foxa3P35584 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Foxa3P35584 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.92□□□□□ -0.5
Foxa3P35584 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Foxa3P35584 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Foxa3P35584 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Foxa3P35584 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.92□□□□□ -0.5
Foxa3P35584 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Foxa3P35584 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Foxa3P35584 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Foxa3P35584 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Foxa3P35584 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Foxa3P35584 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.91□□□□□ -0.5
Foxa3P35584 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Foxa3P35584 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Foxa3P35584 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Gm27704-201ENSMUST00000185094 107 ntBASIC11.91□□□□□ -0.5
Foxa3P35584 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.91□□□□□ -0.5
Foxa3P35584 Gm18041-201ENSMUST00000218210 618 ntBASIC11.91□□□□□ -0.5
Foxa3P35584 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Foxa3P35584 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.91□□□□□ -0.5
Foxa3P35584 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Foxa3P35584 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Foxa3P35584 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa3P35584 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa3P35584 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa3P35584 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Foxa3P35584 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms