Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RxrbP28704 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RxrbP28704 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RxrbP28704 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.35□□□□□ -0.11
RxrbP28704 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RxrbP28704 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.34□□□□□ -0.11
RxrbP28704 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RxrbP28704 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Gm15173-201ENSMUST00000122049 433 ntBASIC14.34□□□□□ -0.11
RxrbP28704 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.34□□□□□ -0.11
RxrbP28704 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.34□□□□□ -0.11
RxrbP28704 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RxrbP28704 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.34□□□□□ -0.11
RxrbP28704 Gm45167-201ENSMUST00000208007 322 ntBASIC14.34□□□□□ -0.11
RxrbP28704 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
RxrbP28704 Rubie-203ENSMUST00000227803 2430 ntBASIC14.34□□□□□ -0.11
RxrbP28704 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.34□□□□□ -0.11
RxrbP28704 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RxrbP28704 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.34□□□□□ -0.11
RxrbP28704 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RxrbP28704 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.33□□□□□ -0.11
RxrbP28704 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RxrbP28704 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.33□□□□□ -0.11
RxrbP28704 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RxrbP28704 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
RxrbP28704 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RxrbP28704 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RxrbP28704 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.33□□□□□ -0.11
RxrbP28704 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Mir8098-201ENSMUST00000184011 137 ntBASIC14.33□□□□□ -0.12
RxrbP28704 Gm17971-201ENSMUST00000190239 806 ntBASIC14.33□□□□□ -0.12
RxrbP28704 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
RxrbP28704 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RxrbP28704 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.33□□□□□ -0.12
RxrbP28704 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
RxrbP28704 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RxrbP28704 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RxrbP28704 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
RxrbP28704 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RxrbP28704 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.32□□□□□ -0.12
RxrbP28704 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.32□□□□□ -0.12
RxrbP28704 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.32□□□□□ -0.12
RxrbP28704 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.32□□□□□ -0.12
RxrbP28704 Gm18246-201ENSMUST00000221023 728 ntBASIC14.32□□□□□ -0.12
RxrbP28704 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RxrbP28704 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RxrbP28704 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RxrbP28704 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.31□□□□□ -0.12
RxrbP28704 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms