Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcnkO88874 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CcnkO88874 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcnkO88874 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CcnkO88874 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.74□□□□□ -0.37
CcnkO88874 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CcnkO88874 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CcnkO88874 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.73□□□□□ -0.37
CcnkO88874 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.73□□□□□ -0.37
CcnkO88874 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.73□□□□□ -0.37
CcnkO88874 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.73□□□□□ -0.37
CcnkO88874 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.73□□□□□ -0.37
CcnkO88874 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.73□□□□□ -0.37
CcnkO88874 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.73□□□□□ -0.37
CcnkO88874 Gm45167-201ENSMUST00000208007 322 ntBASIC12.73□□□□□ -0.37
CcnkO88874 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.73□□□□□ -0.37
CcnkO88874 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CcnkO88874 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CcnkO88874 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CcnkO88874 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CcnkO88874 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CcnkO88874 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.72□□□□□ -0.37
CcnkO88874 Gm13036-201ENSMUST00000117799 748 ntBASIC12.72□□□□□ -0.37
CcnkO88874 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.72□□□□□ -0.37
CcnkO88874 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CcnkO88874 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
CcnkO88874 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.72□□□□□ -0.37
CcnkO88874 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CcnkO88874 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcnkO88874 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.72□□□□□ -0.37
CcnkO88874 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.71□□□□□ -0.37
CcnkO88874 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CcnkO88874 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CcnkO88874 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.71□□□□□ -0.37
CcnkO88874 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.71□□□□□ -0.37
CcnkO88874 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcnkO88874 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms