Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm12070-201ENSMUST00000119551 1002 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Gm12671-201ENSMUST00000119978 1002 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Gm13292-201ENSMUST00000120014 1000 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Gm12403-201ENSMUST00000121384 959 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Gm10359-201ENSMUST00000180167 1002 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Gm12033-201ENSMUST00000180654 1002 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Gm5559-201ENSMUST00000180755 1002 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Gm4335-201ENSMUST00000182581 1004 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcf11G3X9Z4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcf11G3X9Z4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcf11G3X9Z4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcf11G3X9Z4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcf11G3X9Z4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
Pcf11G3X9Z4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcf11G3X9Z4 Gm43598-201ENSMUST00000202482 2479 ntBASIC21.28■■□□□ 1
Pcf11G3X9Z4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcf11G3X9Z4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcf11G3X9Z4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcf11G3X9Z4 Gm45331-201ENSMUST00000209868 554 ntBASIC21.27■□□□□ 0.99
Pcf11G3X9Z4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
Pcf11G3X9Z4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcf11G3X9Z4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Pcf11G3X9Z4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcf11G3X9Z4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Gm12203-201ENSMUST00000118235 598 ntBASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Gm12209-201ENSMUST00000120089 596 ntBASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcf11G3X9Z4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Gm37424-201ENSMUST00000191727 561 ntBASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Gm5161-201ENSMUST00000075243 853 ntBASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcf11G3X9Z4 Gm13730-201ENSMUST00000121036 1462 ntBASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Gm15371-201ENSMUST00000117057 784 ntBASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Gm38230-201ENSMUST00000193572 1159 ntBASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcf11G3X9Z4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms