Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb1A2AQ07 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Tubb1A2AQ07 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tubb1A2AQ07 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tubb1A2AQ07 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb1A2AQ07 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm12882-201ENSMUST00000121696 517 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm29310-201ENSMUST00000185468 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21825-201ENSMUST00000185728 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm29109-201ENSMUST00000185895 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21896-201ENSMUST00000186520 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21873-201ENSMUST00000186728 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21794-201ENSMUST00000187056 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21880-201ENSMUST00000187275 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21826-201ENSMUST00000187451 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21198-201ENSMUST00000188393 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21749-201ENSMUST00000189343 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21901-201ENSMUST00000189568 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm29424-201ENSMUST00000189716 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm28599-201ENSMUST00000189838 694 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21867-201ENSMUST00000189917 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm29269-201ENSMUST00000190087 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21722-201ENSMUST00000190153 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm28423-201ENSMUST00000190701 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21899-201ENSMUST00000190745 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21910-201ENSMUST00000191163 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21849-201ENSMUST00000191571 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm28678-201ENSMUST00000191593 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm20910-201ENSMUST00000193268 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm21871-201ENSMUST00000194621 696 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb1A2AQ07 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb1A2AQ07 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms