Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav8-1A0A075B641 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Gm6623-201ENSMUST00000173570 544 ntBASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav8-1A0A075B641 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Gm19164-201ENSMUST00000210667 640 ntBASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav8-1A0A075B641 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav8-1A0A075B641 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms