Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb2S4R1M3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb2S4R1M3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb2S4R1M3 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Gm24513-201ENSMUST00000174964 138 ntBASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb2S4R1M3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms