Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tubd1Q9R1K7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm13453-201ENSMUST00000118708 357 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm33320-201ENSMUST00000192232 530 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm37714-201ENSMUST00000194742 342 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm44344-201ENSMUST00000200287 129 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm43703-201ENSMUST00000200523 763 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm46209-201ENSMUST00000217912 553 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm18027-201ENSMUST00000218947 619 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm6888-201ENSMUST00000221983 706 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.49□□□□□ -0.09
Tubd1Q9R1K7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Gm27306-201ENSMUST00000183970 107 ntBASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tubd1Q9R1K7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Gm15460-201ENSMUST00000118147 391 ntBASIC14.47□□□□□ -0.09
Tubd1Q9R1K7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms