Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Gm11424-201ENSMUST00000121929 829 ntBASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Gm20445-201ENSMUST00000061905 565 ntBASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.69■□□□□ 0.1
Rsph3bQ9DA80 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Gm6218-201ENSMUST00000219812 628 ntBASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rsph3bQ9DA80 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Gm10275-202ENSMUST00000168697 495 ntBASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Gm10275-201ENSMUST00000092620 635 ntBASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.67■□□□□ 0.1
Rsph3bQ9DA80 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rsph3bQ9DA80 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms