Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.01■□□□□ 0.47
Chmp4bQ9D8B3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Chmp4bQ9D8B3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp4bQ9D8B3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Gm6018-201ENSMUST00000216090 1306 ntBASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Gm8116-201ENSMUST00000182917 1201 ntBASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Gm2213-201ENSMUST00000197485 688 ntBASIC18■□□□□ 0.47
Chmp4bQ9D8B3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Mypopos-202ENSMUST00000205975 2321 ntBASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp4bQ9D8B3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm13365-201ENSMUST00000121188 973 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm24513-201ENSMUST00000174964 138 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm9824-201ENSMUST00000178707 561 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm29310-201ENSMUST00000185468 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21825-201ENSMUST00000185728 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm29109-201ENSMUST00000185895 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21896-201ENSMUST00000186520 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21873-201ENSMUST00000186728 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21794-201ENSMUST00000187056 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21880-201ENSMUST00000187275 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21826-201ENSMUST00000187451 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21198-201ENSMUST00000188393 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21749-201ENSMUST00000189343 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21901-201ENSMUST00000189568 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm29424-201ENSMUST00000189716 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm28599-201ENSMUST00000189838 694 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21867-201ENSMUST00000189917 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm29269-201ENSMUST00000190087 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21722-201ENSMUST00000190153 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm28423-201ENSMUST00000190701 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21899-201ENSMUST00000190745 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21910-201ENSMUST00000191163 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21849-201ENSMUST00000191571 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm28678-201ENSMUST00000191593 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm20910-201ENSMUST00000193268 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm21871-201ENSMUST00000194621 696 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm44608-201ENSMUST00000206827 855 ntBASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp4bQ9D8B3 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Mir6990-201ENSMUST00000183724 91 ntBASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Gm27397-201ENSMUST00000184997 107 ntBASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 AA619741-201ENSMUST00000195095 646 ntBASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp4bQ9D8B3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms