Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.51■□□□□ 0.23
Smc1bQ920F6 Gm44719-201ENSMUST00000206404 149 ntBASIC16.51■□□□□ 0.23
Smc1bQ920F6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.51■□□□□ 0.23
Smc1bQ920F6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc1bQ920F6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.5■□□□□ 0.23
Smc1bQ920F6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Gm24543-201ENSMUST00000103867 82 ntBASIC16.5■□□□□ 0.23
Smc1bQ920F6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Mir7085-201ENSMUST00000184353 66 ntBASIC16.5■□□□□ 0.23
Smc1bQ920F6 Gm18018-201ENSMUST00000198273 408 ntBASIC16.5■□□□□ 0.23
Smc1bQ920F6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc1bQ920F6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Gm12138-201ENSMUST00000122180 951 ntBASIC16.49■□□□□ 0.23
Smc1bQ920F6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.49■□□□□ 0.23
Smc1bQ920F6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Gm9899-201ENSMUST00000065519 555 ntBASIC16.49■□□□□ 0.23
Smc1bQ920F6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.49■□□□□ 0.23
Smc1bQ920F6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc1bQ920F6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.48■□□□□ 0.23
Smc1bQ920F6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Gm12091-201ENSMUST00000146791 830 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Gm9719-201ENSMUST00000162765 543 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 Gm8602-201ENSMUST00000184045 607 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smc1bQ920F6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.48■□□□□ 0.23
Smc1bQ920F6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc1bQ920F6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms