Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Gm9727-201ENSMUST00000161387 555 ntBASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Olfr286-202ENSMUST00000205305 969 ntBASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb4Q91XZ6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.23□□□□□ -0.13
Pcdhb4Q91XZ6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms