Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpp40Q8R1F9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Gm4875-201ENSMUST00000118257 786 ntBASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Gm3436-201ENSMUST00000179930 840 ntBASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.3■□□□□ 0.04
Rpp40Q8R1F9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpp40Q8R1F9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms