Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Gm5779-201ENSMUST00000218467 910 ntBASIC14.64□□□□□ -0.07
CopaQ8CIE6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.64□□□□□ -0.07
CopaQ8CIE6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CopaQ8CIE6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Gm11543-201ENSMUST00000120758 370 ntBASIC14.63□□□□□ -0.07
CopaQ8CIE6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Gm27430-201ENSMUST00000184585 107 ntBASIC14.63□□□□□ -0.07
CopaQ8CIE6 Mir7023-201ENSMUST00000185093 64 ntBASIC14.63□□□□□ -0.07
CopaQ8CIE6 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.63□□□□□ -0.07
CopaQ8CIE6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Gm44333-201ENSMUST00000197168 107 ntBASIC14.63□□□□□ -0.07
CopaQ8CIE6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CopaQ8CIE6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CopaQ8CIE6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.62□□□□□ -0.07
CopaQ8CIE6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Gm18737-201ENSMUST00000173594 937 ntBASIC14.62□□□□□ -0.07
CopaQ8CIE6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.62□□□□□ -0.07
CopaQ8CIE6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CopaQ8CIE6 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.61□□□□□ -0.07
CopaQ8CIE6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms