Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smc5Q8CG46 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.66■□□□□ 0.42
Smc5Q8CG46 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.66■□□□□ 0.42
Smc5Q8CG46 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc5Q8CG46 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Gm6973-201ENSMUST00000117080 721 ntBASIC17.65■□□□□ 0.42
Smc5Q8CG46 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc5Q8CG46 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Smc5Q8CG46 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smc5Q8CG46 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smc5Q8CG46 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Gm44492-201ENSMUST00000197012 141 ntBASIC17.64■□□□□ 0.41
Smc5Q8CG46 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.64■□□□□ 0.41
Smc5Q8CG46 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.64■□□□□ 0.41
Smc5Q8CG46 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc5Q8CG46 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Smc5Q8CG46 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms