Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ptcd1Q8C2E4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ptcd1Q8C2E4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptcd1Q8C2E4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptcd1Q8C2E4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptcd1Q8C2E4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptcd1Q8C2E4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptcd1Q8C2E4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Gm8749-201ENSMUST00000117737 331 ntBASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Gm2451-201ENSMUST00000199447 999 ntBASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Gm10290-201ENSMUST00000200451 999 ntBASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptcd1Q8C2E4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Gm33320-201ENSMUST00000192232 530 ntBASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 AA619741-201ENSMUST00000195095 646 ntBASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Carlr-201ENSMUST00000181515 2574 ntBASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ptcd1Q8C2E4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Gm12390-201ENSMUST00000117897 397 ntBASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptcd1Q8C2E4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms