Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ppp4r4Q8C0Y0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Mir6990-201ENSMUST00000183724 91 ntBASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ppp4r4Q8C0Y0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ppp4r4Q8C0Y0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Gm43474-201ENSMUST00000196415 774 ntBASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ppp4r4Q8C0Y0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms