Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 AV026068-213ENSMUST00000223675 1171 ntBASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.1□□□□□ -0.47
Upk3bQ80YF6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Gm28033-201ENSMUST00000184224 96 ntBASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Ank2-226ENSMUST00000189368 339 ntBASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.09□□□□□ -0.47
Upk3bQ80YF6 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.09□□□□□ -0.47
Upk3bQ80YF6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Upk3bQ80YF6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.08□□□□□ -0.47
Upk3bQ80YF6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms