Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.03□□□□□ -0.48
Rif1Q6PR54 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 BC001981-202ENSMUST00000191393 1545 ntBASIC12.03□□□□□ -0.48
Rif1Q6PR54 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rif1Q6PR54 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.02□□□□□ -0.48
Rif1Q6PR54 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Gm11524-201ENSMUST00000119349 807 ntBASIC12.02□□□□□ -0.48
Rif1Q6PR54 Gm15393-201ENSMUST00000120499 219 ntBASIC12.02□□□□□ -0.48
Rif1Q6PR54 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.02□□□□□ -0.48
Rif1Q6PR54 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.02□□□□□ -0.48
Rif1Q6PR54 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.02□□□□□ -0.48
Rif1Q6PR54 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.02□□□□□ -0.48
Rif1Q6PR54 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Rif1Q6PR54 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rif1Q6PR54 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.02□□□□□ -0.49
Rif1Q6PR54 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Gm11675-201ENSMUST00000121873 832 ntBASIC12.02□□□□□ -0.49
Rif1Q6PR54 Gm8194-201ENSMUST00000159783 859 ntBASIC12.02□□□□□ -0.49
Rif1Q6PR54 Gm37008-201ENSMUST00000195712 319 ntBASIC12.02□□□□□ -0.49
Rif1Q6PR54 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.02□□□□□ -0.49
Rif1Q6PR54 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.02□□□□□ -0.49
Rif1Q6PR54 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.02□□□□□ -0.49
Rif1Q6PR54 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.01□□□□□ -0.49
Rif1Q6PR54 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.01□□□□□ -0.49
Rif1Q6PR54 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.01□□□□□ -0.49
Rif1Q6PR54 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.01□□□□□ -0.49
Rif1Q6PR54 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.01□□□□□ -0.49
Rif1Q6PR54 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rif1Q6PR54 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms