Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snai1Q02085 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snai1Q02085 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snai1Q02085 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snai1Q02085 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snai1Q02085 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Snai1Q02085 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snai1Q02085 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.27■□□□□ 0.36
Snai1Q02085 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Snai1Q02085 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snai1Q02085 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Snai1Q02085 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.27■□□□□ 0.36
Snai1Q02085 Mir1247-201ENSMUST00000116706 82 ntBASIC17.27■□□□□ 0.36
Snai1Q02085 Gm15198-201ENSMUST00000117283 177 ntBASIC17.27■□□□□ 0.36
Snai1Q02085 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.27■□□□□ 0.36
Snai1Q02085 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snai1Q02085 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Snai1Q02085 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snai1Q02085 Gm38671-201ENSMUST00000200573 130 ntBASIC17.27■□□□□ 0.36
Snai1Q02085 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.27■□□□□ 0.36
Snai1Q02085 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snai1Q02085 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Snai1Q02085 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snai1Q02085 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snai1Q02085 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snai1Q02085 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snai1Q02085 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snai1Q02085 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snai1Q02085 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snai1Q02085 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.27■□□□□ 0.35
Snai1Q02085 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snai1Q02085 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.26■□□□□ 0.35
Snai1Q02085 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.26■□□□□ 0.35
Snai1Q02085 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.26■□□□□ 0.35
Snai1Q02085 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Snai1Q02085 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.26■□□□□ 0.35
Snai1Q02085 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.26■□□□□ 0.35
Snai1Q02085 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.26■□□□□ 0.35
Snai1Q02085 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Snai1Q02085 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.26■□□□□ 0.35
Snai1Q02085 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Snai1Q02085 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.26■□□□□ 0.35
Snai1Q02085 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.26■□□□□ 0.35
Snai1Q02085 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snai1Q02085 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Snai1Q02085 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Snai1Q02085 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.25■□□□□ 0.35
Snai1Q02085 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Gm15371-201ENSMUST00000117057 784 ntBASIC17.25■□□□□ 0.35
Snai1Q02085 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.25■□□□□ 0.35
Snai1Q02085 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.25■□□□□ 0.35
Snai1Q02085 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Snai1Q02085 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Gm38223-201ENSMUST00000194484 695 ntBASIC17.25■□□□□ 0.35
Snai1Q02085 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Snai1Q02085 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.25■□□□□ 0.35
Snai1Q02085 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.25■□□□□ 0.35
Snai1Q02085 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snai1Q02085 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.24■□□□□ 0.35
Snai1Q02085 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snai1Q02085 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Snai1Q02085 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snai1Q02085 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snai1Q02085 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms