Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.29□□□□□ -0.44
Smn1P97801 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Smn1P97801 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smn1P97801 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smn1P97801 Gm14042-201ENSMUST00000120139 833 ntBASIC12.28□□□□□ -0.44
Smn1P97801 Gm11764-201ENSMUST00000120221 623 ntBASIC12.28□□□□□ -0.44
Smn1P97801 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.28□□□□□ -0.44
Smn1P97801 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
Smn1P97801 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smn1P97801 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.28□□□□□ -0.44
Smn1P97801 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smn1P97801 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Smn1P97801 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smn1P97801 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.28□□□□□ -0.44
Smn1P97801 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smn1P97801 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.27□□□□□ -0.44
Smn1P97801 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smn1P97801 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Smn1P97801 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smn1P97801 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smn1P97801 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
Smn1P97801 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.27□□□□□ -0.44
Smn1P97801 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smn1P97801 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smn1P97801 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Smn1P97801 Gm6550-201ENSMUST00000187574 993 ntBASIC12.27□□□□□ -0.45
Smn1P97801 Olfr286-202ENSMUST00000205305 969 ntBASIC12.27□□□□□ -0.45
Smn1P97801 Gm6376-201ENSMUST00000209407 580 ntBASIC12.27□□□□□ -0.45
Smn1P97801 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Smn1P97801 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Smn1P97801 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smn1P97801 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Smn1P97801 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smn1P97801 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smn1P97801 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.27□□□□□ -0.45
Smn1P97801 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.27□□□□□ -0.45
Smn1P97801 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smn1P97801 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smn1P97801 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smn1P97801 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.26□□□□□ -0.45
Smn1P97801 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smn1P97801 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smn1P97801 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smn1P97801 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smn1P97801 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smn1P97801 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smn1P97801 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smn1P97801 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms