Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rps28P62858 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC8.35□□□□□ -1.07
Rps28P62858 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Gm37472-201ENSMUST00000192342 4052 ntBASIC8.35□□□□□ -1.07
Rps28P62858 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 AC157950.1-201ENSMUST00000217561 2168 ntBASIC8.35□□□□□ -1.07
Rps28P62858 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 AC129336.2-201ENSMUST00000218053 3086 ntBASIC8.35□□□□□ -1.07
Rps28P62858 Gm42571-201ENSMUST00000201197 2464 ntBASIC8.35□□□□□ -1.07
Rps28P62858 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC8.35□□□□□ -1.07
Rps28P62858 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 AC131739.1-201ENSMUST00000221692 1245 ntBASIC8.35□□□□□ -1.07
Rps28P62858 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Gm45089-201ENSMUST00000208082 2040 ntBASIC8.35□□□□□ -1.07
Rps28P62858 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC8.35□□□□□ -1.07
Rps28P62858 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rps28P62858 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Rps28P62858 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Gm6092-201ENSMUST00000121659 2029 ntBASIC8.34□□□□□ -1.07
Rps28P62858 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rps28P62858 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Rps28P62858 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC8.34□□□□□ -1.07
Rps28P62858 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Gm43014-201ENSMUST00000198568 2443 ntBASIC8.34□□□□□ -1.07
Rps28P62858 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms