Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube2d3P61079 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.26□□□□□ -0.77
Ube2d3P61079 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.26□□□□□ -0.77
Ube2d3P61079 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.26□□□□□ -0.77
Ube2d3P61079 Gm27628-201ENSMUST00000184911 107 ntBASIC10.26□□□□□ -0.77
Ube2d3P61079 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.26□□□□□ -0.77
Ube2d3P61079 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.26□□□□□ -0.77
Ube2d3P61079 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.26□□□□□ -0.77
Ube2d3P61079 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Ube2d3P61079 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.26□□□□□ -0.77
Ube2d3P61079 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ube2d3P61079 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube2d3P61079 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.25□□□□□ -0.77
Ube2d3P61079 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.25□□□□□ -0.77
Ube2d3P61079 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.25□□□□□ -0.77
Ube2d3P61079 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Ube2d3P61079 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.25□□□□□ -0.77
Ube2d3P61079 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.25□□□□□ -0.77
Ube2d3P61079 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.25□□□□□ -0.77
Ube2d3P61079 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.25□□□□□ -0.77
Ube2d3P61079 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.25□□□□□ -0.77
Ube2d3P61079 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ube2d3P61079 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms