Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.77■□□□□ 0.44
AIF1P55008 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
AIF1P55008 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.77■□□□□ 0.44
AIF1P55008 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
AIF1P55008 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.77■□□□□ 0.44
AIF1P55008 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.77■□□□□ 0.44
AIF1P55008 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.77■□□□□ 0.44
AIF1P55008 AC079781.3-201ENST00000449110 356 ntBASIC17.77■□□□□ 0.44
AIF1P55008 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
AIF1P55008 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.77■□□□□ 0.44
AIF1P55008 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.77■□□□□ 0.44
AIF1P55008 AL160237.2-201ENST00000556165 472 ntBASIC17.77■□□□□ 0.44
AIF1P55008 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
AIF1P55008 AL031008.1-201ENST00000619963 541 ntBASIC17.77■□□□□ 0.44
AIF1P55008 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.77■□□□□ 0.44
AIF1P55008 AL805961.1-202ENST00000641562 540 ntBASIC17.77■□□□□ 0.44
AIF1P55008 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AIF1P55008 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AIF1P55008 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AIF1P55008 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AIF1P55008 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AIF1P55008 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.77■□□□□ 0.43
AIF1P55008 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.77■□□□□ 0.43
AIF1P55008 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.77■□□□□ 0.43
AIF1P55008 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AIF1P55008 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
AIF1P55008 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 AC092053.1-201ENST00000605787 1936 ntBASIC17.76■□□□□ 0.43
AIF1P55008 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AIF1P55008 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
AIF1P55008 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 RPS2P1-201ENST00000434010 821 ntBASIC17.76■□□□□ 0.43
AIF1P55008 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.76■□□□□ 0.43
AIF1P55008 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.76■□□□□ 0.43
AIF1P55008 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.76■□□□□ 0.43
AIF1P55008 TERC-201ENST00000602385 541 ntBASIC17.76■□□□□ 0.43
AIF1P55008 AC104692.2-201ENST00000603054 253 ntBASIC17.76■□□□□ 0.43
AIF1P55008 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 AC008735.5-201ENST00000623544 497 ntBASIC17.76■□□□□ 0.43
AIF1P55008 PGM5P2-202ENST00000637225 1043 ntBASIC17.76■□□□□ 0.43
AIF1P55008 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
AIF1P55008 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.76■□□□□ 0.43
AIF1P55008 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AIF1P55008 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AIF1P55008 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
AIF1P55008 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.75■□□□□ 0.43
AIF1P55008 TUBB8P12-201ENST00000308911 1335 ntBASIC17.75■□□□□ 0.43
AIF1P55008 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
AIF1P55008 TUBB7P-202ENST00000428444 1305 ntBASIC17.75■□□□□ 0.43
AIF1P55008 TUBB8P7-204ENST00000567960 1332 ntBASIC17.75■□□□□ 0.43
AIF1P55008 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
AIF1P55008 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
AIF1P55008 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
AIF1P55008 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
AIF1P55008 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.75■□□□□ 0.43
AIF1P55008 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.75■□□□□ 0.43
AIF1P55008 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.75■□□□□ 0.43
AIF1P55008 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.75■□□□□ 0.43
AIF1P55008 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.75■□□□□ 0.43
AIF1P55008 AP002469.2-201ENST00000531724 424 ntBASIC17.75■□□□□ 0.43
AIF1P55008 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.75■□□□□ 0.43
AIF1P55008 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
AIF1P55008 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
AIF1P55008 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 AC060834.1-201ENST00000443027 2032 ntBASIC17.75■□□□□ 0.43
AIF1P55008 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AIF1P55008 AC243591.1-201ENST00000452967 1364 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms