Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Gm29649-201ENSMUST00000185649 419 ntBASIC15.3■□□□□ 0.04
Aldh1a1P24549 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.3■□□□□ 0.04
Aldh1a1P24549 Gm19078-201ENSMUST00000206311 727 ntBASIC15.3■□□□□ 0.04
Aldh1a1P24549 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.3■□□□□ 0.04
Aldh1a1P24549 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.3■□□□□ 0.04
Aldh1a1P24549 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Aldh1a1P24549 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.3■□□□□ 0.04
Aldh1a1P24549 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC15.29■□□□□ 0.04
Aldh1a1P24549 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.29■□□□□ 0.04
Aldh1a1P24549 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.29■□□□□ 0.04
Aldh1a1P24549 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Aldh1a1P24549 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Gm44608-201ENSMUST00000206827 855 ntBASIC15.29■□□□□ 0.04
Aldh1a1P24549 Gm7561-201ENSMUST00000211203 886 ntBASIC15.29■□□□□ 0.04
Aldh1a1P24549 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.29■□□□□ 0.04
Aldh1a1P24549 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Aldh1a1P24549 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Gm15198-201ENSMUST00000117283 177 ntBASIC15.28■□□□□ 0.04
Aldh1a1P24549 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Gm8652-201ENSMUST00000181363 964 ntBASIC15.28■□□□□ 0.04
Aldh1a1P24549 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.28■□□□□ 0.04
Aldh1a1P24549 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aldh1a1P24549 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aldh1a1P24549 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aldh1a1P24549 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Aldh1a1P24549 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aldh1a1P24549 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.27■□□□□ 0.04
Aldh1a1P24549 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Aldh1a1P24549 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms