Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Gm8410-201ENSMUST00000117225 605 ntBASIC12.02□□□□□ -0.49
Hoxa3P02831 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.02□□□□□ -0.49
Hoxa3P02831 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxa3P02831 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa3P02831 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxa3P02831 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Hoxa3P02831 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.02□□□□□ -0.49
Hoxa3P02831 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.01□□□□□ -0.49
Hoxa3P02831 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Gm8749-201ENSMUST00000117737 331 ntBASIC12.01□□□□□ -0.49
Hoxa3P02831 Gm13453-201ENSMUST00000118708 357 ntBASIC12.01□□□□□ -0.49
Hoxa3P02831 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.01□□□□□ -0.49
Hoxa3P02831 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.01□□□□□ -0.49
Hoxa3P02831 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa3P02831 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa3P02831 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hoxa3P02831 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Hoxa3P02831 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hoxa3P02831 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hoxa3P02831 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hoxa3P02831 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hoxa3P02831 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Gm45098-201ENSMUST00000207179 657 ntBASIC12□□□□□ -0.49
Hoxa3P02831 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Hoxa3P02831 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxa3P02831 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Efs-202ENSMUST00000227037 2540 ntBASIC11.99□□□□□ -0.49
Hoxa3P02831 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.99□□□□□ -0.49
Hoxa3P02831 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms